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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868801.1_cds_XP_016433562.1_29707
CDS Infomation

[gene=LOC107760060] [db_xref=GeneID:107760060] [protein=3-isopropylmalate dehydrogenase 2, chloroplastic-like] [protein_id=XP_016433562.1] [location=complement(join(15457..15531,15822..15974,16112..16165,16270..16377,16493..16609,17007..17093,17402..17490,17624..17699,20313..20424,20544..20673,22425..22641))] [gbkey=CDS]
Sequence

ATGGCGGCTTCCTTACAATTCACTGCAACACCTCTAAACCAACTCCAATTTCATTCAAAA
ACGCTGCCCAAACACGCCGCTAAATGGAGTACTCTTCGCTGTTCCGCGGCCTCACCCACC
AAAAGCTACAACATCACTCTTCTTCCCGGCGATGGTATTGGCCCTGAAGTTATTTCTGTT
GCCAAAAATGCCCTCCAACTCGTCGCTTCCCTTGAAGGATTTAATATTGGGTTCGAAGAG
ATGCATGTGGGAGGGGCTGCCTTGGATGCTGTAGGAGTGCCATTGCCTGATGAGACTCTC
AGTTCTGCAAAGAAATCTGATGCTATTCTTCTTGGAGCAATTGGAGGATATAAATGGGAC
AATAATGAAAGACATTTGAGGCCTGAGATGGCATTGCTTCACCTTCGAGGAGCCTTGAAG
GTGTTTGCTAACTTGAGACCTGCAACTGTTTTACCACAGTTAGTAGATGCTTCAACTTTG
AAGAAAGAAGTTGCTGAAGGTGTAGACCTAATGGTTGTTAGGGAACTTACAGGAGGTATT
TATTTTGGTGAACCAAGAGGTATCAGCACTAATGAAAATGGCCAGGAAATAGGTTTCAAC
ACTGAAGTGTATGCAGCATATGAGATCGAAAGAATTGCACGTATTGCATTTGAAACTGCA
AGGAAGCGTCGAGGAAAACTCTGTAGCGTGGATAAAGCAAATGTTTTGGAGGCCTCTATG
CTTTGGAGGAAGACAGTTACAGCACTTGCCTCAGAGTATCCTGATGTAGAGCTCTCTCAC
ATGTATGTTGATAATGCAGCCATGCAACTTGTTCGCAACCCGAAGCAGTTTGATACAATT
GTGACAAACAACATATTTGGTGATATCCTGTCCGATGAAGCATCAATGATTACAGGAAGT
ATCGGGATGCTTCCTTCTGCCAGTCTTGGTGAAACGGGACCTGGATTATTTGAACCTATA
CATGGTTCTGCTCCTGATATTGCTGGGCAGGATAAAGCAAACCCCTTAGCTACAGTGCTC
AGCGCTGCTATGCTTTTGAAATATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATTGAA
GCAGCTGTTTTAGACGCCTTAAATCGAGGATTTCGTACTGGTGACATTCATTCAGCAGGA
CATAAATTGGTTGGTTGCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATTGACAGCAAA
ACTCCCGCTGCTGTTTAA

Peptide Sequence

PEP ID

XP_016433562.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MAASLQFTATPLNQLQFHSKTLPKHAAKWSTLRCSAASPTKSYNITLLPGDGIGPEVISV
AKNALQLVASLEGFNIGFEEMHVGGAALDAVGVPLPDETLSSAKKSDAILLGAIGGYKWD
NNERHLRPEMALLHLRGALKVFANLRPATVLPQLVDASTLKKEVAEGVDLMVVRELTGGI
YFGEPRGISTNENGQEIGFNTEVYAAYEIERIARIAFETARKRRGKLCSVDKANVLEASM
LWRKTVTALASEYPDVELSHMYVDNAAMQLVRNPKQFDTIVTNNIFGDILSDEASMITGS
IGMLPSASLGETGPGLFEPIHGSAPDIAGQDKANPLATVLSAAMLLKYGLGEEKAAQRIE
AAVLDALNRGFRTGDIHSAGHKLVGCKEMGEEVLKSIDSKTPAAV

Transcript Sequence

Gene sequence data has not been registered.